PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000587614
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family WRKY
Protein Properties Length: 148aa    MW: 15566.8 Da    PI: 4.4178
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000587614genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY284.5e-092273459
                   -EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY 34 vkkkversaedpkvveitYegeHnhe 59
                   ++k+ver+++dp+++++tY+ eHnh+
  MDP0000587614  2 ARKQVERNKSDPNIFIVTYTAEHNHP 27
                   89***********************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182903.01E-6129IPR003657WRKY domain
PROSITE profilePS5081113.815129IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.9E-8229IPR003657WRKY domain
PfamPF031066.4E-6227IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MARKQVERNK SDPNIFIVTY TAEHNHPAPT HRNSLAGSTR QKPLSPQTTT GGDSAKPTSP  60
TTSASVDEEP IXAARSTTVE SSCKEEKGSP LITDEEDELL GMCGSVVSDD FFVGLDGLAE  120
DYFSDHSPVS FGMPWISSSA ATAAGSI*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.293972e-98fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008347124.11e-102PREDICTED: WRKY transcription factor 22-like
RefseqXP_008347128.11e-103PREDICTED: WRKY transcription factor 22-like
SwissprotO046095e-37WRK22_ARATH; WRKY transcription factor 22
TrEMBLM5X0143e-79M5X014_PRUPE; Uncharacterized protein
STRINGPOPTR_0014s08600.13e-39(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42053259
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-31WRKY family protein